Home Machine Learning Optimizing Pandas Code: The Influence of Operation Sequence | by Marcin Kozak | Mar, 2024

Optimizing Pandas Code: The Influence of Operation Sequence | by Marcin Kozak | Mar, 2024

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Optimizing Pandas Code: The Influence of Operation Sequence | by Marcin Kozak | Mar, 2024

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PYTHON PROGRAMMING

Discover ways to rearrange your code to attain important velocity enhancements.

Photograph by Nick Fewings on Unsplash

Pandas provide a improbable framework to function on dataframes. In information science, we work with small, huge — and generally very huge dataframes. Whereas analyzing small ones will be blazingly quick, even a single operation on an enormous dataframe can take noticeable time.

On this article I’ll present that always you can also make this time shorter by one thing that prices virtually nothing: the order of operations on a dataframe.

Think about the next dataframe:

import pandas as pd

n = 1_000_000
df = pd.DataFrame({
letter: record(vary(n))
for letter in "abcdefghijklmnopqrstuwxyz"
})

With 1,000,000 rows and 25 columns, it’s huge. Many operation on such a dataframe will probably be noticeable on present private computer systems.

Think about we need to filter the rows, as a way to take these which observe the next situation: a < 50_000 and b > 3000 and choose 5 columns: take_cols=['a', 'b', 'g', 'n', 'x']. We are able to do that within the following manner:

subdf = df[take_cols]
subdf = subdf[subdf['a'] < 50_000]
subdf = subdf[subdf['b'] > 3000]

On this code, we take the required columns first, after which we carry out the filtering of rows. We are able to obtain the identical in a special order of the operations, first performing the filtering after which deciding on the columns:

subdf = df[df['a'] < 50_000]
subdf = subdf[subdf['b'] > 3000]
subdf = subdf[take_cols]

We are able to obtain the exact same end result through chaining Pandas operations. The corresponding pipes of instructions are as follows:

# first take columns then filter rows
df.filter(take_cols).question(question)

# first filter rows then take columns
df.question(question).filter(take_cols)

Since df is huge, the 4 variations will most likely differ in efficiency. Which would be the quickest and which would be the slowest?

Let’s benchmark this operations. We’ll use the timeit module:

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